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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883902.1_cds_XP_016438652.1_34294
CDS Infomation

[gene=LOC107764571] [db_xref=GeneID:107764571] [protein=calcium uptake protein 1, mitochondrial-like isoform X2] [protein_id=XP_016438652.1] [location=join(5722..5965,6056..6123,10358..10581,10800..10883,11786..11999,12625..12921,13044..13205)] [gbkey=CDS]
Sequence

ATGTCAGCTTGGTCAGCTCTCCGGCGATCTCCGCGCTCGGTCCATCGTCTGTATGTTCGT
CATTTAAGTGGAAGTGATAATGTTCAGCAGCATCCAGAAAGCAGTCCAATTTCTTTCCTC
AAATGGGTTGGTGGAATCACTTTAGCTTTCGCACTTTACTCTTATTCTTTCCCCAATCCT
TCTTTGTCTTTTGCTGATACTTCACAATCTCTTCATCATCCTCCACCGAAATATCTCATT
GGAGATGCTTACAGAAGAAAAGTATTCTTTAATTATGAAAAGCGTATCCGGATGCGAAGT
CCTCCTGAAAAGGTGTTTGAGTACTTTGCATCTTTTGAAGCCGATGATGGAGAAATATTT
ATGACACCAGCAGATCTAATGAGAGCAGTTGTTCCTGTGTTCCCTCCATCTGAATCACAC
CTCGTGAGAGATGGATATCTTAGAGGTGAAAGAAGTCCAGGTGAACTGCAATGTGCCCCT
TCAAAGTTTTTTATGCTTTTTGACACAAACAGTGATGGCCACGTATCTTTCAAAGAGTAT
ATATTCTTTGTCACCCTGCTGAGCATCCCTGAATCAAGTTTTTCAGTGGCATTCAAGATG
TTTGATCTCGACAGTAATGGCGAGATAGACATTGATGAATTCAAGAAAGTAATGACTTTG
ATGCGAGCTCACAATAGACAAGGTGCTCATCACAGCGATGGACTTCGAGGGGGGCGTAAT
TTAGGTGGTCATGTAGAGAATGGAGGTCTGTTGCAAGACTTCTTTGGTGAAGATGGGAAG
AAACGCCTCCAATATGACAGATTTGTCCGATTCTTGAGAGATCTGCATGAAGAGATACTA
AAATTGGAGTTTGCCCACTATGATTACAAGTTTCGGGGGACCATTTCAGCAAAGGATTTT
GCCCTGTCCATGGTTGCTGCTGCTGATTTGAAGTACTTAAACAAGTTGCTTGATCGAGTT
GATGATTTAGATAATGAGTCACCGCTAAGTCGTACTAAGATTTCATTTGAGGAATTCAAA
AGTTTTGCTGAGCTGCGGAAGAAGCTGCAACCGTTTTCACTAGCACTTTTCTGTTTCGGG
CAAGTGAATGGTCATTTGACAAGAAGTGATTTTAAAAGAGCTGCTTCTCAGTCATTTCAG
GATTGTCCTTGGCTGGAGAATGATACTCTTGTGTTGTACCTCTGGTGTTTTAACTGGAAC
GTTCTTTATATGTTTAGCTGCTTGTTTAGTTTTCAAGTTTCTTCTGACCAAGTATTAAAC
AGGTATGTGGAGTATCTCTCACTGACAATGTGA

Peptide Sequence

PEP ID

XP_016438652.1
PEP Infomation

PREDICTED: calcium uptake protein 1, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MSAWSALRRSPRSVHRLYVRHLSGSDNVQQHPESSPISFLKWVGGITLAFALYSYSFPNP
SLSFADTSQSLHHPPPKYLIGDAYRRKVFFNYEKRIRMRSPPEKVFEYFASFEADDGEIF
MTPADLMRAVVPVFPPSESHLVRDGYLRGERSPGELQCAPSKFFMLFDTNSDGHVSFKEY
IFFVTLLSIPESSFSVAFKMFDLDSNGEIDIDEFKKVMTLMRAHNRQGAHHSDGLRGGRN
LGGHVENGGLLQDFFGEDGKKRLQYDRFVRFLRDLHEEILKLEFAHYDYKFRGTISAKDF
ALSMVAAADLKYLNKLLDRVDDLDNESPLSRTKISFEEFKSFAELRKKLQPFSLALFCFG
QVNGHLTRSDFKRAASQSFQDCPWLENDTLVLYLWCFNWNVLYMFSCLFSFQVSSDQVLN
RYVEYLSLTM

Transcript Sequence

Gene sequence data has not been registered.